Summary of a cpm object. — summary.cpm • cpmr

This function provides a summary of a cpm object, including the prediction performance and the selected edges.

Usage

# S3 method for class 'cpm'
summary(object, ..., method = c("pearson", "spearman"), edge_level = 0.5)

# S3 method for class 'cpm_summary'
print(x, ...)

Arguments

object: An object of class cpm.
...: Other parameters passed to the function.
method: A character vector indicating the method used to calculate the correlation between the real and predicted values.
edge_level: A numeric value between 0 and 1 indicating the proportional threshold for edge selection.
x: An object of class cpm_summary.

Value

A list of class cpm_summary containing two elements:

performance: A matrix of prediction performance, including the correlation between the real and predicted values for both edges, positive edges only, and negative edges only.
edges: A logical vector indicating whether each edge is selected based on the edge_level.
params: A list of parameters used in the summary.